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iGEM 2008: Novice Bioengineers
Mac Cowell at DIYbio
BioBrick memory stick!
The evolution of biology.
Toward scalable parts families for predictable design of biological circuits.
Synthetic Biology in Seed magazine
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Uncovering mechanisms of bistability in biological systems.
Standardizing experimental protocols.
Survival of the sparsest: robust gene networks are parsimonious
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The incoherent feed-forward loop can generate non-monotonic input functions for genes
Positive feedback of G1 cyclins ensures coherent cell cycle entry
Synthetic biology through biomolecular design and engineering.
Genetic design: rising above the sequence.
Using plasma membrane nanoclusters to build better signaling circuits.
Cell morphology: Breaking the spatial code
Combinatorial promoter design for engineering noisy gene expression
Civil society organizations respond to report on synthetic biology governance
Size control goes global.
Programming gene expression with combinatorial promoters
Accurate prediction of gene feedback circuit behavior from component properties
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Synthetic biology: Designs for life
New insight into the molecular mechanisms of two-partner secretion.
Executable cell biology
Imaging cellular network dynamics in three dimensions using fast 3D laser scanning
EU makes available €1.75 billion for new research under 7th Framework Programme - emphasis on bioenergy and biofuels
Engineering entropy-driven reactions and networks catalyzed by DNA.
Mechanisms controlling cell cycle exit upon terminal differentiation.
Shape, polarity, and multicellular morphogenesis.
Oscillators and the emergence of tissue organization during zebrafish somitogenesis.
Sensor complexes regulating two-component signal transduction.
Synthetic biology: promises and challenges
Artificial cells: building bioinspired systems using small-scale biology.
Along the silk road, spiders make way for mussels.
Wired Science Reveals Secret Codes in Craig Venter's Artificial Genome
The cell cycle: now live and in color.
Visualizing spatiotemporal dynamics of multicellular cell-cycle progression.
Cell division and endoreduplication: doubtful engines of vegetative growth.
Using engineered scaffold interactions to reshape MAP kinase pathway signaling dynamics.
Opportunities in synthetic biology
Choose your partners: dimerization in eukaryotic transcription factors.
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Article Title
1
PSICIC: Noise and Asymmetry in Bacterial Division Revealed by Computational Image Analysis at Sub-Pixel Resolution.
2
Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1.
3
Noncoding RNA control of the making and breaking of sugars.
4
Determination of bacterial rod shape by a novel cytoskeletal membrane protein
5
How a cyanobacterium tells time.
6
Active and passive mechanisms of intracellular transport and localization in bacteria.
7
Small RNAs establish gene expression thresholds.
8
The microbe electric: conversion of organic matter to electricity.
9
New tools for discovering and characterizing microbial diversity.
10
Dissecting the quorum-sensing receptor LuxN.
11
The FtsEX ABC transporter directs cellular differentiation in Bacillus subtilis.
12
A sensor histidine kinase co-ordinates cell wall architecture with cell division in Bacillus subtilis.
13
Structure of lumazine protein, an optical transponder of luminescent bacteria.
14
Identification of Residues Important for Cleavage of the Extracellular Signaling Peptide, CSF, of B. subtilis From Its' Precursor Protein.
15
The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters.
16
SlrR/SlrA control the initiation of biofilm formation in Bacillus subtilis.
17
Tsr-GFP accumulates linearly with time at cell poles, and can be used to differentiate "old" versus "new" poles, in E.coli.
18
Recombination of synthetic oligonucleotides with prokaryotic chromosomes: substrate requirements of the Escherichia coli/lambdaRed and Sulfolobus acidocaldarius recombination systems.
19
Functional expression in Bacillus subtilis of mammalian NADPH-cytochrome P450 oxidoreductase and its spore-display.
20
Engineering microbial consortia: a new frontier in synthetic biology.
21
Rhodobacter sphaeroides: complexity in chemotactic signalling.
22
Ecology and genomics of Bacillus subtilis.
23
Bacterial secretion: Structural snapshot
24
The FtsEX ABC transporter directs cellular differentiation in Bacillus subtilis.
25
A sensor histidine kinase co-ordinates cell wall architecture with cell division in Bacillus subtilis.
26
Chemosensory pathways, motility and development in Myxococcus xanthus
27
Microbial regulatory and metabolic networks.
28
Z-ring force and cell shape during division in rod-like bacteria.
29
Spatial Organization of Myxococcus xanthus During Fruiting Body Formation.
30
Spatial Organization of Myxococcus xanthus During Fruiting Body Formation.
31
Z-ring force and cell shape during division in rod-like bacteria.
32
Cellular microbiology: Synchronized switching
33
Self-Organization in High-Density Bacterial Colonies: Efficient Crowd Control
34
Structure of PlcR: Insights into virulence regulation and evolution of quorum sensing in Gram-positive bacteria
35
A photosensory two-component system regulates bacterial cell attachment
36
Duplication and segregation of the actin (MreB) cytoskeleton during the prokaryotic cell cycle
37
Cooperation and conflict in quorum-sensing bacterial populations
38
Thinking about Bacillus subtilis as a multicellular organism.
39
Bacterial morphology: why have different shapes?
40
Cell shape determination in Escherichia coli.
41
Shape determination in Bacillus subtilis.
42
Polarity of motility systems in Myxococcus xanthus.
43
A Wall of Funnels Concentrates Swimming Bacteria.
44
Polar explorations Recent insights into the polarity of bacterial proteins.
45
Microbes churn out hydrogen at record rate
46
Together we stand: bacteria organize to survive hostile zones
47
A Quorum on Bacterial Programmed Cell Death.
48
Npro fusion technology to produce proteins with authentic N termini in E. coli
49
Polarity of motility systems in Myxococcus xanthus.
50
Cell shape determination in Escherichia coli.
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